Clinical Proteomics Core Lab: References
- Sanghar GK, Teuber M, Ravindran R, Keller EJ, Raffuse A S, Hernandez PA, Linderholm A, Echt G, Franzi L, Tuermer-Lee K, Juarez M, Albertson TE, Khan IH, Haczku A. "Real-life observation of wildfire smoke-impaired COVID-19 vaccine immunity". J Allergy Clin Immunol. 2025 Apr;155(4):1371-1377.e6. doi: 10.1016/j.jaci.2025.01.035. Epub 2025 Feb 7. PMID: 39924122; PMCID: PMC12235088.
- Sin TN, Tng N, Dragoli J, Ramesh Kumar S, Villafuerte-Trisolini C, Chung SH, Tu L, Le SM, Shim JH, Pepple KL, Ravindran R, Khan IH, Moshiri A, Thomasy SM, Yiu G. "Safety and efficacy of CRISPR-mediated genome ablation of VEGFA as a treatment for choroidal neovascularization in nonhuman primate eyes". Mol Ther. 2025 Aug 6;33(8):3939-3954. doi: 10.1016/j.ymthe.2024.09.027. Epub 2024 Sep 27. PMID: 39342431.
- Yaseen F, Taj M, Ravindran R, Zaffar F, Luciw PA, Ikram A, Zafar SI, Gill T, Hogarth M, Khan IH. "An exploratory deep learning approach to investigate tuberculosis pathogenesis in nonhuman primate model: Combining automated radiological analysis with clinical and biomarkers data". J Med Primatol. 2024 Aug;53(4):e12722. doi: 10.1111/jmp.12722. PMID: 38949157.
- Rashidi HH, Ikram A, Dang LT, Bashir A, Zohra T, Ali A, Tanvir H, Mudassar M, Ravindran R, Akhtar N, Sikandar RI, Umer M, Akhter N, Butt R, Fennell BD, Khan IH. "Comparing machine learning screening approaches using clinical data and cytokine profiles for COVID-19 in resource-limited and resource-abundant settings". Sci Rep. 2024 Jun 28;14(1):14892. doi: 10.1038/s41598-024-63707-3. PMID: 38937503; PMCID: PMC11211475.
- Vaziri F, Setayesh T, Hu Y, Ravindran R, Wei D, Wan YY. "BCG as an Innovative Option for HCC Treatment: Repurposing and Mechanistic Insights". Adv Sci (Weinh). 2024 Apr;11(14):e2308242. doi: 10.1002/advs.202308242. Epub 2024 Feb 2. PMID: 38308164; PMCID: PMC11005731.
- Ravindran R, Kang H, McReynolds C, Sanghar GK, Chang WLW, Ramasamy S, Kolloli A, Kumar R, Subbian S, Hammock BD, Hartigan-O'Connor DJ, Ikram A, Haczku A, Khan IH. "Dynamics of temporal immune responses in nonhuman primates and humans immunized with COVID-19 vaccines". PLoS One. 2023 Oct 19;18(10):e0287377. doi: 10.1371/journal.pone.0287377. PMID: 37856429; PMCID: PMC10586671.
- Ravindran R, O'Connor E, Gupta A, Luciw PA, Khan AI, Dorreh N, Chiang K, Ikram A, Reddy S. "Lipid Mediators and Cytokines/Chemokines Display Differential Profiles in Severe versus Mild/Moderate COVID-19 Patients". Int J Mol Sci. 2023 Aug 22;24(17):13054. doi: 10.3390/ijms241713054. PMID: 37685858; PMCID: PMC10488250.
- Nguyen CT, Furuya H, Das D, Marusina AI, Merleev AA, Ravindran R, Jalali Z, Khan IH, Maverakis E, Adamopoulos IE. "Peripheral γδ T Cells Regulate Neutrophil Expansion and Recruitment in Experimental Psoriatic Arthritis". Arthritis Rheumatol. 2022 Sep;74(9):1524-1534. doi: 10.1002/art.42124. Epub 2022 Jul 21. PMID: 35320625; PMCID: PMC9427669.
- "Automated machine learning for endemic active tuberculosis prediction from multiplex serological data". Sci Rep. 2021 09 09; 11(1):17900. Rashidi HH, Dang LT, Albahra S, Ravindran R, Khan IH. PMID: 34504228; PMCID: PMC8429671.
View in: PubMed - "Immune response dynamics in COVID-19 patients to SARS-CoV-2 and other human coronaviruses". PLoS One. 2021; 16(7):e0254367. Ravindran R, McReynolds C, Yang J, Hammock BD, Ikram A, Ali A, Bashir A, Zohra T, Chang WLW, Hartigan-O'Connor DJ, Rashidi HH, Khan IH. PMID: 34242356; PMCID: PMC8270414.
View in: PubMed - "Plasma Linoleate Diols Are Potential Biomarkers for Severe COVID-19 Infections". Front Physiol. 2021; 12:663869. McReynolds CB, Cortes-Puch I, Ravindran R, Khan IH, Hammock BG, Shih PB, Hammock BD, Yang J. PMID: 33868029; PMCID: PMC8047414.
View in: PubMed - "Gut microbiome dysbiosis and correlation with blood biomarkers in active-tuberculosis in endemic setting". PLoS One. 2021; 16(1):e0245534. Khaliq A, Ravindran R, Afzal S, Jena PK, Akhtar MW, Ambreen A, Wan YY, Malik KA, Irfan M, Khan IH. PMID: 33481833; PMCID: PMC7822526.
View in: PubMed - "Evaluation of multi-antigen serological screening for active tuberculosis among people living with HIV". PLoS One. 2020; 15(6):e0234130. Jaganath D, Rajan J, Yoon C, Ravindran R, Andama A, Asege L, Mwebe SZ, Katende J, Nakaye M, Semitala FC, Khan IH, Cattamanchi A. PMID: 32497095; PMCID: PMC7272080.
View in: PubMed - "Diagnostic performance of blood inflammatory markers for tuberculosis screening in people living with HIV". PLoS One. 2018; 13(10):e0206119. Farr K, Ravindran R, Strnad L, Chang E, Chaisson LH, Yoon C, Worodria W, Andama A, Ayakaka I, Bbosa Nalwanga P, Byanyima P, Kalema N, Kaswabuli S, Katagira W, Aman KD, Musisi E, Tumwine NW, Sanyu I, Ssebunya R, Davis JL, Huang L, Khan IH, Cattamanchi A. PMID: 30352099; PMCID: PMC6198956.
View in: PubMed - "Evaluation of antibody responses to panels of M. tuberculosis antigens as a screening tool for active tuberculosis in Uganda". PLoS One. 2017; 12(8):e0180122. Shete PB, Ravindran R, Chang E, Worodria W, Chaisson LH, Andama A, Davis JL, Luciw PA, Huang L, Khan IH, Cattamanchi A. PMID: 28767658; PMCID: PMC5540581.
View in: PubMed - "Field evaluation of a blood based test for active tuberculosis in endemic settings". PLoS One. 2017; 12(4):e0173359. Khaliq A, Ravindran R, Hussainy SF, Krishnan VV, Ambreen A, Yusuf NW, Irum S, Rashid A, Jamil M, Zaffar F, Chaudhry MN, Gupta PK, Akhtar MW, Khan IH. PMID: 28380055; PMCID: PMC5381859.
View in: PubMed - "Development of immune-biomarkers of pulmonary tuberculosis in a rabbit model". Tuberculosis (Edinb). 2016 12; 101:1-7. Dehnad A, Ravindran R, Subbian S, Khan IH. PMID: 27865378.
View in: PubMed - "Gender biased immune-biomarkers in active tuberculosis and correlation of their profiles to efficacy of therapy". Tuberculosis (Edinb). 2016 07; 99:17-24. Chavez K, Ravindran R, Dehnad A, Khan IH. PMID: 27450000.
View in: PubMed - "Abnormal Mammary Development in 129:STAT1-Null Mice is Stroma-Dependent". PLoS One. 2015; 10(6):e0129895. Chen JQ, Mori H, Cardiff RD, Trott JF, Hovey RC, Hubbard NE, Engelberg JA, Tepper CG, Willis BJ, Khan IH, Ravindran RK, Chan SR, Schreiber RD, Borowsky AD. PMID: 26075897; PMCID: PMC4468083.
View in: PubMed - "Data mining strategies to improve multiplex microbead immunoassay tolerance in a mouse model of infectious diseases". PLoS One. 2015; 10(1):e0116262. Mani A, Ravindran R, Mannepalli S, Vang D, Luciw PA, Hogarth M, Khan IH, Krishnan VV. PMID: 25614982; PMCID: PMC4304816.
View in: PubMed - "Multiplexed measurements of immunomodulator levels in peripheral blood of healthy subjects: Effects of analytical variables based on anticoagulants, age, and gender". Cytometry B Clin Cytom. 2014 Nov; 86(6):426-35. Krishnan VV, Ravindran R, Wun T, Luciw PA, Khan IH, Janatpour K. PMID: 24574151.
View in: PubMed - "Plasma antibody profiles in non-human primate tuberculosis". J Med Primatol. 2014 Apr; 43(2):59-71. Ravindran R, Krishnan VV, Dhawan R, Wunderlich ML, Lerche NW, Flynn JL, Luciw PA, Khan IH. PMID: 24446897.
- "Exploratory study on plasma immunomodulator and antibody profiles in tuberculosis patients". Clin Vaccine Immunol. 2013 Aug; 20(8):1283-90. Ravindran R, Krishnan VV, Khanum A, Luciw PA, Khan IH. PMID: 23761664; PMCID: PMC3754529.
View in: PubMed - "Plasma antibody profiles as diagnostic biomarkers for tuberculosis". Clin Vaccine Immunol. 2011 Dec; 18(12):2148-53. Khan IH, Ravindran R, Krishnan VV, Awan IN, Rizvi SK, Saqib MA, Shahzad MI, Tahseen S, Ireton G, Goulding CW, Felgner P, DeRiemer K, Khanum A, Luciw PA. PMID: 21976221; PMCID: PMC3232686.
View in: PubMed - "Stereological analysis of bacterial load and lung lesions in nonhuman primates (rhesus macaques) experimentally infected with Mycobacterium tuberculosis". Am J Physiol Lung Cell Mol Physiol. 2011 Nov; 301(5):L731-8. Luciw PA, Oslund KL, Yang XW, Adamson L, Ravindran R, Canfield DR, Tarara R, Hirst L, Christensen M, Lerche NW, Offenstein H, Lewinsohn D, Ventimiglia F, Brignolo L, Wisner ER, Hyde DM. PMID: 21873450; PMCID: PMC3213984.
View in: PubMed - "Validation of multiplex microbead immunoassay for simultaneous serodetection of multiple infectious agents in laboratory mouse". J Immunol Methods. 2010 Dec 15; 363(1):51-9. Ravindran R, Khan IH, Krishnan VV, Ziman M, Kendall LV, Frasier JM, Bates R, Griffey SM, Fahey JR, Luciw PA. PMID: 20965193.
View in: PubMed - "Profiling antibodies to Mycobacterium tuberculosis by multiplex microbead suspension arrays for serodiagnosis of tuberculosis". Clin Vaccine Immunol. 2008 Mar; 15(3):433-8. Khan IH, Ravindran R, Yee J, Ziman M, Lewinsohn DM, Gennaro ML, Flynn JL, Goulding CW, DeRiemer K, Lerche NW, Luciw PA. PMID: 18077619; PMCID: PMC2268277.
